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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRNL1Attractin-like protein 1 isoform X1. (1377 aa)    
Predicted Functional Partners:
MGRN1
E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.585
PAFAH1B1
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 0.576
TBC1D31
TBC1 domain family member 31 isoform X1.
    
 0.576
BCS1L
Mitochondrial chaperone BCS1.
      
 0.472
SLX4IP
Protein SLX4IP isoform X1.
      
 0.469
RNF157
RING finger protein 157 isoform X1.
   
 
 0.453
KIT
Mast/stem cell growth factor receptor Kit isoform X1.
   
  
 0.440
ASIP
Agouti signaling protein.
    
 
 0.431
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.