Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEI4Meiosis-specific protein MEI4-like isoform X1. (423 aa)    
Predicted Functional Partners:
REC114
Meiotic recombination protein REC114.
    
 
 0.914
CENPQ
Centromere protein Q isoform X1.
      
 0.911
CENPV
Centromere protein V.
      
 0.685
CCDC36
Coiled-coil domain-containing protein 36.
      
 0.537
SPO11
Meiotic recombination protein SPO11 isoform X1.
      
 0.537
MLH3
DNA mismatch repair protein Mlh3 isoform X1.
      
 0.464
MEI1
Meiosis inhibitor protein 1-like isoform X1.
      
 0.419
DMC1
Meiotic recombination protein DMC1/LIM15 homolog isoform X1.
      
 0.407
C14orf39
Protein SIX6OS1.
      
 0.405
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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