close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL5339S ribosomal protein L53, mitochondrial. (109 aa)    
Predicted Functional Partners:
LOC107216391
39S ribosomal protein L50, mitochondrial.
   
 
 0.932
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
    
 
 0.902
MRPL51
39S ribosomal protein L51, mitochondrial.
    
 
 0.887
ENSPMJP00000007005
annotation not available
   
   0.874
MRPS33
28S ribosomal protein S33, mitochondrial.
   
 
 0.870
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.859
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.855
MRPS30
28S ribosomal protein S30, mitochondrial.
    
   0.850
MRPL22
39S ribosomal protein L22, mitochondrial.
   
   0.838
MRPL13
39S ribosomal protein L13, mitochondrial.
   
   0.838
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.