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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRFBP1Serum response factor-binding protein 1. (437 aa)    
Predicted Functional Partners:
POLRMT
DNA-directed RNA polymerase, mitochondrial isoform X1.
   
 0.963
BYSL
Essential nuclear protein 1.
   
 
 0.846
TSR1
Pre-rRNA-processing protein TSR1 homolog.
   
 
 0.775
PWP2
Periodic tryptophan protein 2 homolog.
   
 
 0.763
MRPS7
28S ribosomal protein S7, mitochondrial.
  
 
 0.753
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
     
 0.742
RPS11
Small subunit ribosomal protein S11e.
  
 
 0.741
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
  
 0.733
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
   0.726
WDR3
U3 small nucleolar RNA-associated protein 12.
   
   0.718
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.