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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RYBPRING1 and YY1-binding protein isoform X1. (228 aa)    
Predicted Functional Partners:
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.983
PCGF1
Polycomb group RING finger protein 1.
    
 0.904
PCGF6
Polycomb group RING finger protein 6 isoform X1.
    
 0.903
KDM2B
F-box and leucine-rich repeat protein 10/11.
    
 
 0.901
KDM2A
F-box and leucine-rich repeat protein 10/11.
    
 
 0.901
E2F6
Transcription factor E2F6 isoform X1.
   
 0.873
L3MBTL2
Lethal(3)malignant brain tumor-like protein 2 isoform X1.
    
 0.865
PCGF5
Polycomb group RING finger protein 5 isoform X1.
    
 0.857
PCGF3
Polycomb group RING finger protein 3 isoform X1.
    
 0.843
ENSPMJP00000002371
annotation not available
    
 0.830
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.