Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAG3BAG family molecular chaperone regulator 3. (560 aa)    
Predicted Functional Partners:
HSPB8
Heat shock protein beta-8.
   
 
 0.994
HSPA4
Heat shock 70 kDa protein 4.
   
 0.983
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.947
HSPB1
Heat shock protein beta-1.
   
 
 0.940
SQSTM1
Sequestosome-1 isoform X1.
    
 
 0.906
LITAF
Lipopolysaccharide-induced tumor necrosis factor-alpha factor.
    
 
 0.867
CRYAB
Alpha-crystallin B chain isoform X1.
   
 
 0.849
BAG2
BAG family molecular chaperone regulator 2.
    
 0.843
HSPH1
Heat shock protein 105 kDa isoform X1.
   
 0.836
HSPA2
Heat shock-related 70 kDa protein 2.
   
 0.822
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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