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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000006741annotation not available (124 aa)    
Predicted Functional Partners:
SPC25
Kinetochore protein Spc25, animal type.
    
 0.571
NUF2
Kinetochore protein Nuf2.
   
 0.554
ENSPMJP00000003984
Transcription factor AP-1-like.
   
 0.553
JUN
Transcription factor AP-1.
   
 0.553
JUND
Transcription factor jun-D.
   
 0.553
PMF1
Polyamine-modulated factor 1.
    
 0.481
MAPK9
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 0.445
MAPK10
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 0.445
MAPK8
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 0.445
LOC107199075
Kinetochore protein NDC80 homolog isoform X2.
    
 0.435
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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