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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP4R2Serine/threonine-protein phosphatase 4 regulatory subunit 2. (406 aa)    
Predicted Functional Partners:
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
   
 0.998
PPP4R3A
Serine/threonine-protein phosphatase 4 regulatory subunit 3A.
   
 
 0.892
PTPA
Serine/threonine-protein phosphatase 2A activator isoform X1.
   
 
 0.863
PPP6C
Protein phosphatase 6 catalytic subunit.
    
 0.819
LOC107201462
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 4 regulatory subunit 3B-like.
   
 
 0.800
PPP4R3B
Serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X1.
   
 
 0.800
GSR
Glutathione reductase, mitochondrial.
    
 0.741
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
 0.741
ENSPMJP00000001413
annotation not available
    
 0.684
PPEF2
Serine/threonine-protein phosphatase with EF-hands 2.
    
 0.684
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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