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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALDH7A1Alpha-aminoadipic semialdehyde dehydrogenase. (535 aa)    
Predicted Functional Partners:
CHDH
Choline dehydrogenase, mitochondrial.
  
 
 0.952
AASS
Alpha-aminoadipic semialdehyde synthase, mitochondrial isoform X1.
  
 
 0.950
ADH5
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 0.947
LOC107202990
Alcohol dehydrogenase 1-like isoform X1.
  
 0.947
LOC107202991
Alcohol dehydrogenase 1 isoform X1.
  
 0.947
ABAT
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase.
  
 0.945
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase isoform X1.
 
 0.942
AGXT2
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
 
 0.942
UPB1
Beta-ureidopropionase.
   
 0.942
ACSS2
Acetyl-coenzyme A synthetase, cytoplasmic isoform X1.
  
 0.939
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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