Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5Complement C5. (1606 aa)    
Predicted Functional Partners:
C8A
Complement component 8 subunit alpha.
   
 0.999
C8B
Complement component C8 beta chain isoform X1.
   
 0.999
C9
Complement component C9.
   
 0.998
C7
Complement component C7 isoform X1.
   
 0.998
LOC107199300
C5a anaphylatoxin chemotactic receptor 1-like.
    
 0.992
C6
Complement component C6 isoform X1.
   
 
 0.955
F2
Coagulation factor II, thrombin.
   
 0.949
C3AR1
C3a anaphylatoxin chemotactic receptor.
    
 0.927
C8G
Complement C8 gamma chain.
   
 0.924
CFI
Complement factor I.
   
 0.806
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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