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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCMT2TRNA wybutosine-synthesizing protein 4 isoform X2. (698 aa)    
Predicted Functional Partners:
TYW5
TRNA wybutosine-synthesizing protein 5.
 
    
 0.909
GSR
Glutathione reductase, mitochondrial.
    
 0.790
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
 0.790
TRMT12
TRNA wybutosine-synthesizing protein 2 homolog isoform X3.
   
  
 0.725
TYW1
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase.
   
  
 0.687
TYW3
tRNA-yW synthesizing protein 3 homolog.
   
  
 0.685
TRMT5
TRNA (guanine(37)-N1)-methyltransferase isoform X2.
   
  
 0.672
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1.
    
 0.660
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
 0.660
ADSL
Adenylosuccinate lyase.
      
 0.651
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.