Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPMJP00000004202 | INSM1 | ENSPMJP00000004202 | ENSPMJP00000018062 | Paired box protein Pax-4-like. | Insulinoma-associated protein 1. | 0.486 |
ENSPMJP00000004202 | NEUROG2 | ENSPMJP00000004202 | ENSPMJP00000006862 | Paired box protein Pax-4-like. | Neurogenin 2. | 0.496 |
EWSR1 | NEUROG2 | ENSPMJP00000025826 | ENSPMJP00000006862 | RNA-binding protein EWS. | Neurogenin 2. | 0.699 |
EWSR1 | SOX17 | ENSPMJP00000025826 | ENSPMJP00000002736 | RNA-binding protein EWS. | Transcription factor SOX17 (SOX group F). | 0.508 |
INSM1 | ENSPMJP00000004202 | ENSPMJP00000018062 | ENSPMJP00000004202 | Insulinoma-associated protein 1. | Paired box protein Pax-4-like. | 0.486 |
INSM1 | NEUROG2 | ENSPMJP00000018062 | ENSPMJP00000006862 | Insulinoma-associated protein 1. | Neurogenin 2. | 0.596 |
NEUROG2 | ENSPMJP00000004202 | ENSPMJP00000006862 | ENSPMJP00000004202 | Neurogenin 2. | Paired box protein Pax-4-like. | 0.496 |
NEUROG2 | EWSR1 | ENSPMJP00000006862 | ENSPMJP00000025826 | Neurogenin 2. | RNA-binding protein EWS. | 0.699 |
NEUROG2 | INSM1 | ENSPMJP00000006862 | ENSPMJP00000018062 | Neurogenin 2. | Insulinoma-associated protein 1. | 0.596 |
NEUROG2 | SOX17 | ENSPMJP00000006862 | ENSPMJP00000002736 | Neurogenin 2. | Transcription factor SOX17 (SOX group F). | 0.451 |
SOX17 | EWSR1 | ENSPMJP00000002736 | ENSPMJP00000025826 | Transcription factor SOX17 (SOX group F). | RNA-binding protein EWS. | 0.508 |
SOX17 | NEUROG2 | ENSPMJP00000002736 | ENSPMJP00000006862 | Transcription factor SOX17 (SOX group F). | Neurogenin 2. | 0.451 |