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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALPK1Alpha-protein kinase 1 isoform X1. (1199 aa)    
Predicted Functional Partners:
TIFA
TRAF-interacting protein with FHA domain-containing protein A isoform X1.
   
 
 0.832
TRAF6
TNF receptor-associated factor 6.
     
 0.603
MAP3K7
Mitogen-activated protein kinase kinase kinase 7 isoform X1.
     
 0.549
TDRD7
Tudor domain-containing protein 7 isoform X1.
   
    0.483
AGMO
Alkylglycerol monooxygenase isoform X1.
      
 0.445
MAP3K20
Mitogen-activated protein kinase kinase kinase MLT isoform X1.
     
 0.419
IRAK2
Interleukin-1 receptor-associated kinase-like 2 isoform X1.
     
 0.415
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.