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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1LProtein phosphatase 1L. (227 aa)    
Predicted Functional Partners:
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
   
 0.621
ENSPMJP00000006951
annotation not available
 
      0.615
DBT
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
   
 0.572
VAPA
Vesicle-associated membrane protein-associated protein A.
    
 0.552
AANAT
Arylalkylamine N-acetyltransferase.
    
   0.541
VAPB
Vesicle-associated membrane protein-associated protein B/C.
    
 0.498
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.480
MTFMT
Methionyl-tRNA formyltransferase, mitochondrial isoform X1.
  
   0.420
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
    
 0.416
TAB3
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1.
    
 0.416
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.