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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UGT82-hydroxyacylsphingosine 1-beta-galactosyltransferase. (546 aa)    
Predicted Functional Partners:
GALC
Galactocerebrosidase isoform X1.
     
 0.919
UGCG
Ceramide glucosyltransferase.
   
 
 0.915
CERK
Ceramide kinase.
     
 0.911
GBA2
Non-lysosomal glucosylceramidase-like.
     
 0.906
SMPD1
Sphingomyelin phosphodiesterase.
     
 0.906
ASAH1
Acid ceramidase.
     
 0.905
DEGS1
Sphingolipid 4-desaturase/C4-monooxygenase.
     
 0.902
SMPD2
Sphingomyelin phosphodiesterase 2 isoform X1.
     
 0.902
LOC107206597
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like.
  
  
 
0.902
DEGS2
Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 isoform X1.
     
 0.902
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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