close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107198963Class II histocompatibility antigen, B-L beta chain-like isoform X1. (326 aa)    
Predicted Functional Partners:
CD74
HLA class II histocompatibility antigen gamma chain isoform X1.
   
 0.987
CD4
T-cell surface glycoprotein CD4 isoform X1.
   
 0.962
ENSPMJP00000004267
Class II histocompatibility antigen, B-L beta chain-like.
  
  
 
0.904
HLA-DRA
HLA class II histocompatibility antigen, DR alpha chain.
     
 
0.900
ENSPMJP00000003255
annotation not available
   
  0.829
INS
Insulin.
    
 
 0.800
RPS14
Small subunit ribosomal protein S14e.
   
 0.729
RPL30
Large subunit ribosomal protein L30e.
    
  0.727
VIM
Vimentin.
    
  0.655
CAMP
Cathelicidin antimicrobial peptide.
   
   0.633
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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