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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCCIPBRCA2 and CDKN1A-interacting protein. (307 aa)    
Predicted Functional Partners:
RPL23
Large subunit ribosomal protein L23e.
    
 
 0.866
RPF2
Ribosome production factor 2 homolog.
   
  
 0.790
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
    0.753
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein isoform X1.
   
    0.736
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
    0.731
BRCA2
Breast cancer type 2 susceptibility protein isoform X1.
    
 
 0.718
SUOX
Sulfite oxidase, mitochondrial.
      
 0.690
ZNHIT6
Zinc finger HIT-type containing 6.
   
  
 0.684
EIF6
Eukaryotic translation initiation factor 6.
    
 
 0.671
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
 
 0.668
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.