STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT7CCR4-NOT transcription complex subunit 7/8. (286 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X6.
   
 0.983
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 0.971
CNOT9
Cell differentiation protein RCD1 homolog isoform X1.
   
 0.971
CNOT4
CCR4-NOT transcription complex subunit 4 isoform X1.
    
 0.964
DCP2
MRNA-decapping enzyme subunit 2.
    
 
 0.955
CNOT8
CCR4-NOT transcription complex subunit 7/8.
  
  
0.953
DDX6
DEAD-box helicase 6.
   
 0.911
CNOT10
CCR4-NOT transcription complex subunit 10 isoform X1.
    
 0.907
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.890
CNOT6L
CCR4-NOT transcription complex subunit 6-like isoform X1.
    
 0.846
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.