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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIF1CKinesin family member 1C. (632 aa)    
Predicted Functional Partners:
KIF1B-2
Kinesin-like protein KIF1B isoform X1.
 
      0.821
PRC1
Protein regulator of cytokinesis 1.
   
 0.568
KIF23
Kinesin-like protein KIF23 isoform X1.
   
0.505
CIT
Citron Rho-interacting kinase isoform X1.
   
 0.480
ARID4A
AT-rich interaction domain 4A.
    
 
 0.465
ARID4B
AT-rich interactive domain-containing protein 4B isoform X2.
    
 
 0.465
KIF11
Kinesin-like protein KIF11 isoform X1.
   
 
0.461
RACGAP1
Rac GTPase-activating protein 1.
   
 0.450
ZW10
Centromere/kinetochore protein zw10 homolog.
     
 0.425
KIF4A
Chromosome-associated kinesin KIF4A.
   
0.419
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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