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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEPCE7SK snRNA methylphosphate capping enzyme. (206 aa)    
Predicted Functional Partners:
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 
 0.960
CDK9
Cyclin-dependent kinase 9 isoform X1.
    
 
 0.876
HEXIM1
Protein HEXIM1-like.
    
 
 0.794
SART3
Squamous cell carcinoma antigen recognized by T-cells 3.
    
 
 0.755
CCNT1
Cyclin-T1 isoform X1.
    
 
 0.699
BIN3
Bridging integrator 3 isoform X3.
      
 0.613
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
    
 
 0.573
POP1
Ribonucleases P/MRP protein subunit POP1.
    
 
 0.571
CCNT2
Cyclin-T2 isoform X1.
    
 
 0.569
METTL16
Methyltransferase-like protein 16 isoform X1.
    
 
 0.538
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.