Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
KCNT1Potassium channel subfamily T member 1 isoform X1. (1169 aa)    
Predicted Functional Partners:
KCNMB1
Potassium large conductance calcium-activated channel subfamily M beta member 1.
    
 0.668
DYM
Dymeclin isoform X1.
      
 0.664
SLC25A22
Solute carrier family 25 (mitochondrial glutamate transporter), member 18/22.
      
 0.558
C3orf67
Uncharacterized protein C3orf67 homolog isoform X1.
      
 0.536
PMPCA
Mitochondrial-processing peptidase subunit alpha.
    
 
 0.509
SURF6
Surfeit 6.
      
 0.506
UBAC1
Ubiquitin-associated domain-containing protein 1 isoform X1.
      
 0.496
KLHL7
Kelch-like protein 7.
      
 0.494
PTPRN2
Receptor-type tyrosine-protein phosphatase N2.
      
 0.494
SURF4
Surfeit locus protein 4 isoform X1.
      
 0.494
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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