Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMPD3AMP deaminase 3 isoform X1. (835 aa)    
Predicted Functional Partners:
AMPD1
AMP deaminase 1 isoform X1.
  
 
0.969
APRT
Adenine phosphoribosyltransferase.
   
 0.961
ADK
Adenosine kinase isoform X1.
    
 0.958
AK3
GTP:AMP phosphotransferase AK3, mitochondrial isoform X1.
   
 
 0.946
IMPDH2
Inosine-5'-monophosphate dehydrogenase 2 isoform X1.
  
 0.940
ADSL
Adenylosuccinate lyase.
     
 0.940
ITPA
Inosine triphosphatase.
    
 0.940
HPRT1
Hypoxanthine-guanine phosphoribosyltransferase.
     
 0.939
ENTPD5
Ectonucleoside triphosphate diphosphohydrolase 5/6.
   
 
 0.939
AMPD2
AMP deaminase 2.
  
  
 
0.937
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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