Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB1Ankyrin repeat and SOCS box protein 1. (392 aa)    
Predicted Functional Partners:
CUL5
Cullin-5 isoform X1.
    
 0.966
ELOC
Transcription elongation factor B polypeptide 1.
    
 0.917
ASB6
Ankyrin repeat and SOCS box protein 6.
    
 0.738
RNF7
RING-box protein 2 isoform X1.
    
 0.681
TRAF3IP1
TRAF3-interacting protein 1 isoform X1.
    
 0.655
CISH
Cytokine inducible SH2-containing protein.
     
 0.633
KCTD7
BTB/POZ domain-containing protein KCTD7/14.
     
 0.610
TBL2
Transducin beta-like protein 2.
    
 0.592
LOC107199423
NEDD8-like.
    
 0.550
PEAR1
Platelet endothelial aggregation receptor 1.
     
 0.544
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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