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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRIP3Nuclear receptor-interacting protein 3 isoform X1. (429 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 
 0.573
TBC1D30
TBC1 domain family member 30 isoform X3.
    
 
 0.509
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
 
 0.500
RAD23A
UV excision repair protein RAD23 homolog A.
   
 
 0.498
RAD23B
UV excision repair protein RAD23 homolog B isoform X1.
   
 
 0.498
OASL
2'-5'-oligoadenylate synthase-like protein.
   
 
 0.488
ENSPMJP00000027002
Ubiquitin.
   
 
 0.488
PSMD2
26S proteasome non-ATPase regulatory subunit 2.
    
 
 0.472
UBQLN4
Ubiquilin 4.
   
 
 0.432
UBQLN1
Ubiquilin-1 isoform X1.
   
 
 0.432
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.