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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPARGC1BPeroxisome proliferator-activated receptor gamma coactivator 1-beta. (990 aa)    
Predicted Functional Partners:
NRF1
Nuclear respiratory factor 1 isoform X1.
     
 0.807
NCBP1
Nuclear cap-binding protein subunit 1.
    
   0.707
PPARG
Peroxisome proliferator-activated receptor gamma.
    
 0.588
ESRRG
Estrogen-related receptor gamma isoform X1.
    
 0.567
ESRRB
Steroid hormone receptor ERR2 isoform X1.
    
 0.567
SLC7A1
Solute carrier family 7 (cationic amino acid transporter), member 1.
      
 0.533
PPARA
Peroxisome proliferator-activated receptor alpha.
    
 0.528
PRDM16
PR domain zinc finger protein 16 isoform X1.
      
 0.523
LOC107203868
Nuclear cap-binding protein subunit 2.
    
 
 0.448
LOC107209014
Nuclear cap-binding protein subunit 2 isoform X1.
    
 
 0.448
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.