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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARRDC3Arrestin domain-containing protein 3. (315 aa)    
Predicted Functional Partners:
TXN
Thioredoxin 1.
    
 0.749
AQP8
Aquaporin-8.
      
 0.687
NEDD4L
E3 ubiquitin-protein ligase NEDD4-like isoform X1.
    
 
 0.576
NEDD4
E3 ubiquitin-protein ligase NEDD4 isoform X1.
    
 
 0.576
AQP4
Aquaporin-4 isoform X4.
      
 0.533
LOC107199208
Aquaporin-2.
      
 0.533
NME8
Thioredoxin domain-containing protein 3.
    
 0.524
ENSPMJP00000001475
annotation not available
    
 0.483
ENSPMJP00000023083
annotation not available
    
 0.483
LYSMD3
LysM and putative peptidoglycan-binding domain-containing protein 3.
      
 0.467
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.