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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf116Chromosome 9 open reading frame 116. (146 aa)    
Predicted Functional Partners:
C2H5orf49
Uncharacterized protein C5orf49 homolog.
    
 
 0.829
EFCAB1
EF-hand calcium-binding domain-containing protein 1 isoform X1.
    
 
 0.829
TEKT1
Tektin-1.
   
 
 0.809
ARMC3
Armadillo repeat containing 3.
   
 
 0.802
LOC107211007
Tektin-4-like.
   
   0.730
ARMC4
Armadillo repeat-containing protein 4 isoform X1.
   
 
 0.707
TEKT3
Tektin-3.
   
   0.699
IQUB
IQ and ubiquitin-like domain-containing protein isoform X1.
      
 0.674
EFHC2
EF-hand domain-containing family member C2 isoform X1.
    
 
 0.672
TEKT2
Tektin-2.
   
   0.658
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.