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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3TC2SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1. (1190 aa)    
Predicted Functional Partners:
LITAF
Lipopolysaccharide-induced tumor necrosis factor-alpha factor.
   
  
 0.678
FIG4
Phosphatidylinositol 3,5-bisphosphate 5-phosphatase.
      
 0.678
GDAP1
Ganglioside-induced differentiation-associated protein 1.
      
 0.675
SBF2
Myotubularin-related protein 13 isoform X1.
      
 0.672
FGD4
FYVE, RhoGEF and PH domain-containing protein 4 isoform X1.
      
 0.636
AP5S1
AP-5 complex subunit sigma-1.
      
 0.541
IGHMBP2
ATP-dependent RNA/DNA helicase IGHMBP2.
      
 0.533
SH3TC1
SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1.
      
0.532
LOC107201522
C->U-editing enzyme APOBEC-1-like isoform X1.
  
     0.484
LRSAM1
E3 ubiquitin-protein ligase LRSAM1 isoform X1.
      
 0.476
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.