STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSRP1Structure-specific recognition protein 1. (702 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.999
SUPT6H
Transcription elongation factor SPT6.
   
 0.955
CDC73
Cell division cycle 73.
   
 0.940
ENSPMJP00000007827
annotation not available
    
 0.924
SUPT4H1
Transcription elongation factor SPT4.
    
 0.922
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 0.915
RTF1
RNA polymerase-associated protein RTF1 homolog.
   
 0.894
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1.
   
 0.881
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.879
IWS1
Protein IWS1 homolog isoform X1.
   
 0.874
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.