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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS51Vacuolar protein sorting-associated protein 51 homolog. (782 aa)    
Predicted Functional Partners:
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform X1.
    
 0.998
ENSPMJP00000002489
annotation not available
   
 0.989
VPS50
Syndetin.
    
 
 0.974
VPS54
VPS54 subunit of GARP complex.
   
 0.965
STX6
Syntaxin 6.
    
 0.926
EIPR1
EARP and GARP complex-interacting protein 1.
   
 
 0.876
STX8
Syntaxin-8 isoform X1.
    
 0.863
STX16
Syntaxin 16.
    
 0.847
COG5
Conserved oligomeric Golgi complex subunit 5 isoform X1.
   
 
 0.839
COG1
Conserved oligomeric Golgi complex subunit 1 isoform X1.
   
 
 0.835
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.