Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMDN3Regulator of microtubule dynamics protein 3 isoform X3. (455 aa)    
Predicted Functional Partners:
VAPB
Vesicle-associated membrane protein-associated protein B/C.
    
 0.808
VAPA
Vesicle-associated membrane protein-associated protein A.
    
 0.732
YWHAB
14-3-3 protein beta/theta/zeta.
    
   0.659
STARD3NL
MLN64 N-terminal domain homolog isoform X1.
      
 0.511
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.496
PTPN1
Tyrosine-protein phosphatase non-receptor type 1.
    
 0.495
GPAM
Glycerol-3-phosphate acyltransferase 1, mitochondrial isoform X1.
  
 
 0.486
RPS15
Small subunit ribosomal protein S15e.
    
   0.443
SLC66A3
PQ-loop repeat-containing protein 3 isoform X1.
      
 0.434
STARD3
StAR-related lipid transfer protein 3.
      
 0.433
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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