STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGO4Eukaryotic translation initiation factor 2C. (910 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer.
   
 0.819
AGO2
Eukaryotic translation initiation factor 2C.
  
 
0.745
DROSHA
Ribonuclease III.
   
 0.716
ENSPMJP00000000984
annotation not available
    
 0.668
LOC107209537
RISC-loading complex subunit TARBP2-like.
    
 0.668
MRPL44
39S ribosomal protein L44, mitochondrial.
   
 0.663
TSNAX
Translin-associated protein X isoform X1.
    
 0.645
TSN
Translin.
   
 0.644
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 
 0.593
DDX6
DEAD-box helicase 6.
   
 
 0.560
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.