STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C4General transcription factor 3C polypeptide 4. (719 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor 3C polypeptide 5 (transcription factor C subunit 1).
   
 0.931
GTF3C2
General transcription factor IIIC subunit 2.
    
 0.926
GTF3C3
General transcription factor 3C polypeptide 3 (transcription factor C subunit 4).
   
 0.921
GTF3C6
General transcription factor 3C polypeptide 6 isoform X1.
    
 0.857
GTF3C1
General transcription factor 3C polypeptide 1 isoform X1.
   
 0.844
ENSPMJP00000013555
annotation not available
   
 0.844
POLR3A
DNA-directed RNA polymerase III subunit RPC1 isoform X1.
   
 
 0.798
BRF1
Transcription factor IIIB 90 kDa subunit isoform X1.
     
 0.772
ZNF512B
Zinc finger protein 512B isoform X1.
    
 0.764
ZNF512
Zinc finger protein 512 isoform X2.
    
 0.764
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.