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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRAP3Thyroid hormone receptor-associated protein 3 isoform X1. (967 aa)    
Predicted Functional Partners:
BCLAF1
Bcl-2-associated transcription factor 1 isoform X1.
  
 
0.837
ARL6IP4
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2.
    
 
 0.553
INVS
Inversin.
    
 0.545
ERH
Enhancer of rudimentary homolog.
   
 
 0.545
CMTM6
CKLF like MARVEL transmembrane domain containing 6.
      
 0.533
METTL6
Methyltransferase-like protein 6 isoform X1.
      
 0.531
CD151
CD151 antigen.
      
 0.525
PPM1G
Protein phosphatase 1G isoform X1.
   
  
 0.499
PDXDC1
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.473
RSRC1
Serine/Arginine-related protein 53.
    
 0.455
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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