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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB17Ras-related protein Rab-17. (213 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.953
RBSN
Rabenosyn-5 isoform X1.
   
 0.863
APPL2
DCC-interacting protein 13-beta isoform X1.
   
 
 0.856
APPL1
DCC-interacting protein 13 alpha.
    
 
 0.856
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.836
RABEP1
Rab GTPase-binding effector protein 1 isoform X1.
    
 0.791
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.
    
 0.763
VPS45
Vacuolar protein sorting-associated protein 45 isoform X1.
    
 0.759
GAK
Cyclin-G-associated kinase isoform X1.
   
 0.754
CHM
Rab proteins geranylgeranyltransferase component A 1 isoform X1.
    
 0.681
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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