Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TKFCTriose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing). (582 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase (TIM).
    
 0.988
GPD2
Glycerol-3-phosphate dehydrogenase, mitochondrial-like.
  
 
 0.979
IFIH1
Interferon-induced helicase C domain-containing protein 1 isoform X1.
    
 0.966
ALDOB
Fructose-bisphosphate aldolase, class I.
   
 
 0.927
ALDOC
Fructose-bisphosphate aldolase, class I.
   
 
 0.927
SORD
L-iditol 2-dehydrogenase.
  
 0.858
GLYCTK
Glycerate 2-kinase.
  
  
 0.841
GPD1L
Glycerol-3-phosphate dehydrogenase 1-like protein.
   
 
 0.830
GPD1
Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic.
   
 
 0.830
LOC107207486
Glycerol-3-phosphate dehydrogenase 1-like protein.
   
 
 0.830
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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