Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLEC10 | COLEC11 | ENSPMJP00000014828 | ENSPMJP00000013725 | Collectin sub-family member 10. | Collectin sub-family member 11. | 0.871 |
COLEC10 | FIBCD1 | ENSPMJP00000014828 | ENSPMJP00000008402 | Collectin sub-family member 10. | Fibrinogen C domain-containing protein 1. | 0.434 |
COLEC11 | COLEC10 | ENSPMJP00000013725 | ENSPMJP00000014828 | Collectin sub-family member 11. | Collectin sub-family member 10. | 0.871 |
COLEC11 | FIBCD1 | ENSPMJP00000013725 | ENSPMJP00000008402 | Collectin sub-family member 11. | Fibrinogen C domain-containing protein 1. | 0.434 |
FIBCD1 | COLEC10 | ENSPMJP00000008402 | ENSPMJP00000014828 | Fibrinogen C domain-containing protein 1. | Collectin sub-family member 10. | 0.434 |
FIBCD1 | COLEC11 | ENSPMJP00000008402 | ENSPMJP00000013725 | Fibrinogen C domain-containing protein 1. | Collectin sub-family member 11. | 0.434 |
FIBCD1 | PTX3 | ENSPMJP00000008402 | ENSPMJP00000008038 | Fibrinogen C domain-containing protein 1. | Pentraxin 3. | 0.495 |
FIBCD1 | SKI | ENSPMJP00000008402 | ENSPMJP00000017776 | Fibrinogen C domain-containing protein 1. | Ski oncogene. | 0.450 |
PTX3 | FIBCD1 | ENSPMJP00000008038 | ENSPMJP00000008402 | Pentraxin 3. | Fibrinogen C domain-containing protein 1. | 0.495 |
SKI | FIBCD1 | ENSPMJP00000017776 | ENSPMJP00000008402 | Ski oncogene. | Fibrinogen C domain-containing protein 1. | 0.450 |