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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNALI1Dynein axonemal light intermediate chain 1. (234 aa)    
Predicted Functional Partners:
GAS8
Growth arrest-specific protein 8.
  
 
 
 0.778
DNAI1
Dynein intermediate chain 1, axonemal isoform X1.
  
  
 0.685
DNAI2
Dynein intermediate chain 2, axonemal.
   
  
 0.683
ZMYND10
Zinc finger MYND domain-containing protein 10 isoform X1.
   
  
 0.663
TCTEX1D2
Tctex1 domain-containing protein 2.
  
  
 0.657
ARMC4
Armadillo repeat-containing protein 4 isoform X1.
   
 
 0.656
CCDC65
Coiled-coil domain containing 65.
    
 
 0.655
IFT52
Intraflagellar transport protein 52 homolog.
      
 0.650
PIH1D3
Dynein assembly factor 6, axonemal.
   
  
 0.646
RSPH9
Radial spoke head protein 9 homolog.
  
  
 0.644
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.