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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YRDCYrdC domain-containing protein, mitochondrial. (427 aa)    
Predicted Functional Partners:
OSGEPL1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X1.
  
 
 0.742
OSGEP
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
  
 
 0.693
TP53RK
TP53 regulating kinase and related kinases.
   
  
 0.676
WDR4
WD repeat domain 4.
   
  
 0.650
PUDP
Pseudouridine-5'-phosphatase isoform X1.
  
 
  0.558
WDR73
WD repeat-containing protein 73 isoform X1.
   
  
 0.543
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
     
 0.508
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
  
 0.506
UBXN4
UBX domain-containing protein 1/4.
      
 0.493
RRP8
Ribosomal RNA-processing protein 8 isoform X1.
   
  
 0.475
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.