Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD6CD6 molecule. (537 aa)    
Predicted Functional Partners:
ALCAM
Activated leukocyte cell adhesion molecule.
    
 0.998
CD5
T-cell surface glycoprotein CD5 isoform X1.
   
 
 0.872
CD2
T-cell surface antigen CD2 isoform X1.
   
 0.731
CD247
LOW QUALITY PROTEIN: T-cell surface glycoprotein CD3 zeta chain.
   
 
 0.698
NGLY1
Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X1.
      
 0.678
CD3E
CD3e molecule.
   
 
 0.598
SH2D1A
SH2 domain-containing protein 1A isoform X1.
   
 
 0.597
APMAP
Adipocyte plasma membrane-associated protein isoform X1.
      
 0.581
PTPRJ
Protein tyrosine phosphatase receptor type J.
    
 0.577
COG1
Conserved oligomeric Golgi complex subunit 1 isoform X1.
     
 0.564
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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