Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CACNB2Voltage-dependent L-type calcium channel subunit beta-2 isoform X1. (614 aa)    
Predicted Functional Partners:
PRKACB
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
   
  0.902
CACNA2D1
Voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2.
   
 0.803
ENSPMJP00000003141
annotation not available
   
 0.767
CACNA2D2
Voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1.
   
 0.767
CACNA1D
Voltage-dependent L-type calcium channel subunit alpha-1D isoform X1.
   
 0.758
CACNA1B
Calcium voltage-gated channel subunit alpha1 B.
   
 0.730
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 0.716
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 0.716
CACNA1E
Voltage-dependent R-type calcium channel subunit alpha-1E isoform X1.
   
 0.687
CAMK2D
Calcium/calmodulin dependent protein kinase II delta.
   
 0.673
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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