Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLSTN3Calsyntenin 3. (975 aa)    
Predicted Functional Partners:
LRRTM1
Leucine-rich repeat transmembrane neuronal protein 1/2.
   
  
 0.911
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1.
      
 0.645
USP5
Ubiquitin carboxyl-terminal hydrolase 5 isoform X1.
      
 0.571
SH3BP5
LOW QUALITY PROTEIN: SH3 domain-binding protein 5.
      
 0.571
CDCA3
Cell division cycle-associated protein 3.
      
 0.549
APLP2
Amyloid-like protein 2 isoform X1.
   
 
 0.537
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
   
  
 0.527
P2RX6
P2X purinoceptor 6 isoform X1.
      
 0.506
NXN
Nucleoredoxin.
      
 0.484
RASSF9
Ras association domain-containing protein 9 isoform X1.
      
 0.473
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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