STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRRX2Paired mesoderm homeobox protein 2. (247 aa)    
Predicted Functional Partners:
FKBP10
Peptidyl-prolyl cis-trans isomerase FKBP10.
   
  
 0.802
COL6A2
Collagen type VI alpha 2 chain.
   
 
 0.777
VGLL3
Vestigial like family member 3.
      
 0.774
POSTN
Periostin isoform X1.
      
 0.743
THBS1
Thrombospondin 1.
   
 0.712
TGFB3
Transforming growth factor beta-3.
    
 
 0.705
TIMP2
LOW QUALITY PROTEIN: metalloproteinase inhibitor 2.
      
 0.704
FBN1
Fibrillin 1.
    
 0.695
EFEMP1
EGF-containing fibulin-like extracellular matrix protein 1.
   
 0.693
ENSPMJP00000008698
Proto-oncogene Mas-like.
    
 
 0.692
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.