STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1639S ribosomal protein L16, mitochondrial. (251 aa)    
Predicted Functional Partners:
MRPL2
Mitochondrial ribosomal protein L2.
  
 0.994
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 0.984
ENSPMJP00000007005
annotation not available
   
 0.982
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 0.982
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 0.981
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 0.980
MRPL13
39S ribosomal protein L13, mitochondrial.
  
 0.980
MRPL17
39S ribosomal protein L17, mitochondrial.
  
 0.980
MRPS15
28S ribosomal protein S15, mitochondrial isoform X1.
   
 
 0.979
RPL23
Large subunit ribosomal protein L23e.
  
 0.978
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.