Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CORO1BCoronin-1B/1C/6. (493 aa)    
Predicted Functional Partners:
ACTR2
Actin-related protein 2 isoform X1.
   
 
 0.562
DHFR
Dihydrofolate reductase.
    
 0.523
IFT80
Intraflagellar transport protein 80 homolog.
   
   0.455
DSTN
Destrin (actin-depolymerizing factor).
   
 
 0.451
CFL2
Cofilin-2.
   
 
 0.451
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
  
  
 0.438
FPGS
Folylpolyglutamate synthase.
    
 0.435
IFT57
Intraflagellar transport protein 57 homolog.
    
   0.434
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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