Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107206310Glycine N-acyltransferase-like protein 3. (277 aa)    
Predicted Functional Partners:
SKP2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
   
 0.770
SKP1
S-phase kinase-associated protein 1.
    
 0.727
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
   
 
 0.641
CCNJ
Cyclin-J.
   
 0.626
CCNA2
Cyclin-A2 isoform X1.
   
 0.626
CCNF
F-box protein 1 (cyclin F).
   
 0.626
CCNA1
Cyclin-A1.
   
 0.626
CDC6
Cell division control protein 6 homolog isoform X1.
   
 
 0.589
ENSPMJP00000002373
Claudin-22-like.
   
 0.583
CDK4
Cyclin-dependent kinase 4-like.
   
 0.583
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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