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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGLY1Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X1. (655 aa)    
Predicted Functional Partners:
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
    
 0.967
RAD23B
UV excision repair protein RAD23 homolog B isoform X1.
    
 0.963
RAD23A
UV excision repair protein RAD23 homolog A.
    
 0.959
PSMC1
26S proteasome regulatory subunit T2.
    
 0.900
UBXN1
UBX domain-containing protein 1/4.
    
 0.877
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
    
 0.863
DERL1
Derlin-1 isoform X1.
    
 0.861
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.799
ENSPMJP00000027002
Ubiquitin.
    
 0.797
SPATA5
Spermatogenesis-associated protein 5 isoform X1.
    
 0.785
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.