STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN2Matrilin-2 isoform X1. (1305 aa)    
Predicted Functional Partners:
FZD6
Frizzled 6.
    
 
 0.665
ENSPMJP00000025069
annotation not available
   
 0.577
LUM
Lumican.
   
 0.559
NIPAL2
NIPA-like protein 2 isoform X1.
      
 0.509
CST7
Cystatin-F isoform X1.
      
 0.467
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
   
 
 0.465
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 
 0.455
DCN
Decorin.
   
 0.433
NLK
Serine/threonine-protein kinase NLK isoform X1.
    
 
 0.422
MFAP5
Microfibrillar-associated protein 5.
   
 
 0.420
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.