Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPCeruloplasmin-like isoform X1. (1080 aa)    
Predicted Functional Partners:
SLC40A1
Solute carrier family 40 (iron-regulated transporter), member 1.
    
 0.951
FECH
Protoporphyrin/coproporphyrin ferrochelatase.
   
 
 0.927
FXN
Frataxin, mitochondrial isoform X1.
     
 0.916
FTH1
Ferritin heavy chain 1.
     
 0.909
LOC107199045
Ferritin, higher subunit.
     
 0.909
HMOX1
Heme oxygenase 1 isoform X1.
     
 0.908
HMOX2
Heme oxygenase 2.
     
 0.908
ENSPMJP00000024292
annotation not available
  
  
 
0.903
HEPH
Hephaestin isoform X1.
  
  
 
0.902
ATP7A
Copper-transporting ATPase 1 isoform X1.
  
 
 0.684
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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