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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CROTPeroxisomal carnitine O-octanoyltransferase isoform X1. (612 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein.
   
 
 0.844
PEX10
Peroxisome biogenesis factor 10 isoform X1.
     
 0.708
PEX13
Peroxisome biogenesis factor 13.
     
 0.652
PEX12
Peroxisome assembly protein 12.
     
 0.651
HADHB
Trifunctional enzyme subunit beta, mitochondrial.
   
  
 0.626
PEX5L
PEX5-related protein isoform X1.
     
 0.601
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
     
 0.601
TYSND1
Peroxisomal leader peptide-processing protease.
     
 0.575
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
   
 
 0.566
HSD17B4
Peroxisomal multifunctional enzyme type 2 isoform X1.
   
 
 0.543
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.